Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
egfl7EGF-like-domain, multiple 7. (298 aa)    
Predicted Functional Partners:
W5N366_LEPOC
Sprouty related EVH1 domain containing 1.
    
 
 0.694
egf
Epidermal growth factor.
    
 0.685
W5NNN1_LEPOC
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.677
cutc
CutC copper transporter homolog (E. coli).
      
 0.673
fkbpl
FKBP prolyl isomerase like.
    
 0.658
fbxw2
F-box and WD repeat domain containing 2.
    
 
 0.584
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.552
W5NBA0_LEPOC
Family with sequence similarity 50 member A.
    
 
 0.541
kbtbd3
Kelch repeat and BTB (POZ) domain containing 3.
    
 
 0.506
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.491
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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