STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102687390Lecithin-cholesterol acyltransferase. (430 aa)    
Predicted Functional Partners:
W5MA33_LEPOC
Apolipoprotein A-IV b, tandem duplicate 2.
   
 0.951
pla2g4a
Phospholipase A2.
   
 
 0.886
pemt
Phosphatidylethanolamine N-methyltransferase; Catalyzes the three sequential steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME), PMME to phosphatidyldimethylethanolamine (PDME), and PDME to phosphatidylcholine (PC); Belongs to the class VI-like SAM-binding methyltransferase superfamily. PEMT/PEM2 methyltransferase family.
   
 0.868
W5MGL6_LEPOC
Apolipoprotein A-Ia.
   
 0.851
pld1
Phospholipase.
     
 0.821
W5N7K7_LEPOC
Phospholipase D2.
     
 0.821
pnpla7
Patatin-like phospholipase domain containing 7b.
     
 0.810
LOC102698342
Patatin-like phospholipase domain containing 6.
     
 0.810
LOC102688611
Phospholipase.
     
 0.805
pld4
Phospholipase D family member 4.
   
 
 0.795
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.