STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697294RGS domain-containing protein. (217 aa)    
Predicted Functional Partners:
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.790
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.667
W5MSM4_LEPOC
Protein kinase domain-containing protein.
    
 0.667
W5N3J1_LEPOC
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
  
 0.649
LOC102688480
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.616
LOC102686398
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.616
LOC102686598
Uncharacterized protein.
    
 0.616
W5LXB8_LEPOC
APC regulator of WNT signaling pathway 2.
    
 0.606
apc
APC regulator of WNT signaling pathway.
    
 0.606
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
 0.606
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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