STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsm14bLSM family member 14B. (388 aa)    
Predicted Functional Partners:
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 
 0.944
dcp2
Decapping mRNA 2.
    
 
 0.929
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.927
W5M9Z3_LEPOC
DEAD (Asp-Glu-Ala-Asp) box helicase 61.
   
 
 0.927
W5NBI9_LEPOC
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
    
 
 0.890
dcp1a
Decapping mRNA 1A.
    
 
 0.845
W5NIT2_LEPOC
Decapping mRNA 1B.
    
 
 0.845
W5MC45_LEPOC
YjeF N-terminal domain containing 3.
    
 
 0.684
W5MQR3_LEPOC
NAD(P)HX epimerase.
    
 
 0.684
pabpc4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.675
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.