Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M822_LEPOCLatexin. (302 aa)    
Predicted Functional Partners:
W5M9R2_LEPOC
Netrin g2a.
      
 0.687
cux2
Homeobox protein cut-like.
      
 0.473
W5MQY7_LEPOC
OMA1 zinc metallopeptidase.
      
 0.464
npepl1
Aminopeptidase like 1.
      
 0.459
W5NN73_LEPOC
Transcriptional and immune response regulator a.
      
 0.451
arhgap11a
Rho GTPase activating protein 11A.
      
 0.426
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.425
MTERF1
Mitochondrial transcription termination factor 1.
  
     0.423
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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