STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mms19MMS19 homolog, cytosolic iron-sulfur assembly component. (1041 aa)    
Predicted Functional Partners:
ciao2b
Cytosolic iron-sulfur assembly component 2B.
    
 0.996
ciao1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
    
 0.995
ciao2a
Cytosolic iron-sulfur assembly component 2A.
    
 0.984
W5LWZ8_LEPOC
DEAD_2 domain-containing protein.
    
 0.961
W5NAQ1_LEPOC
Excision repair cross-complementation group 2.
    
 0.961
ciao3
Nuclear prelamin A recognition factor-like; Belongs to the NARF family.
    
 0.886
LOC102695873
Excision repair cross-complementation group 3.
   
 
 0.869
W5LXJ3_LEPOC
DNA_pol_B domain-containing protein.
    
 0.863
DNA2
DNA replication helicase/nuclease 2.
    
 0.862
pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.846
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.