STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M8I8_LEPOCUncharacterized protein. (763 aa)    
Predicted Functional Partners:
W5NCA1_LEPOC
Germ cell nuclear acidic peptidase.
    
 0.921
tbp
TATA box binding protein.
    
 0.890
W5M7S7_LEPOC
Wu:fj64h06.
    
 0.859
HINT1
Histidine triad nucleotide binding protein 1.
    
 0.859
W5N276_LEPOC
Histidine triad nucleotide binding protein 2.
    
 0.859
tbpl1
TBP-like 1.
    
 0.816
glod5
Glyoxalase domain containing 5.
    
 0.779
ttf1
Uncharacterized protein.
     
 0.741
fhit
Si:ch211-63i20.3.
    
 0.729
hint3
Histidine triad nucleotide binding protein 3.
    
 0.729
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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