Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M8J0_LEPOCScavenger receptor class B, member 2a; Belongs to the CD36 family. (536 aa)    
Predicted Functional Partners:
cd63
Tetraspanin.
     
 0.927
W5ME63_LEPOC
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
     
 0.919
W5N1Y4_LEPOC
Tetraspanin.
     
 0.919
scarb2
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
  
  
 
0.902
W5MH50_LEPOC
Glucosylceramidase.
   
 
 0.830
W5MQB6_LEPOC
PKD domain-containing protein.
   
 
 0.830
apob
Apolipoprotein Bb, tandem duplicate 1.
    
 0.693
W5MA33_LEPOC
Apolipoprotein A-IV b, tandem duplicate 2.
    
 0.692
W5M7V9_LEPOC
Uncharacterized protein.
   
 0.668
W5N906_LEPOC
N-acylsphingosine amidohydrolase (acid ceramidase) 1b; Belongs to the acid ceramidase family.
     
 0.627
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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