Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KDM1B | LOC102692404 | ENSLOCP00000007127 | ENSLOCP00000011701 | Lysine demethylase 1B. | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.632 |
KDM1B | ZNF516 | ENSLOCP00000007127 | ENSLOCP00000004743 | Lysine demethylase 1B. | Zinc finger protein 516. | 0.862 |
KDM1B | ctbp1 | ENSLOCP00000007127 | ENSLOCP00000013457 | Lysine demethylase 1B. | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.632 |
KDM1B | ctbp2 | ENSLOCP00000007127 | ENSLOCP00000009690 | Lysine demethylase 1B. | C-terminal binding protein 2a. | 0.632 |
KDM1B | kdm1a | ENSLOCP00000007127 | ENSLOCP00000005363 | Lysine demethylase 1B. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.782 |
LOC102692404 | KDM1B | ENSLOCP00000011701 | ENSLOCP00000007127 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Lysine demethylase 1B. | 0.632 |
LOC102692404 | W5MTG2_LEPOC | ENSLOCP00000011701 | ENSLOCP00000011671 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized protein. | 0.407 |
LOC102692404 | ZNF516 | ENSLOCP00000011701 | ENSLOCP00000004743 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Zinc finger protein 516. | 0.637 |
LOC102692404 | ctbp1 | ENSLOCP00000011701 | ENSLOCP00000013457 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.837 |
LOC102692404 | ctbp2 | ENSLOCP00000011701 | ENSLOCP00000009690 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | C-terminal binding protein 2a. | 0.849 |
LOC102692404 | kdm1a | ENSLOCP00000011701 | ENSLOCP00000005363 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.830 |
LOC102692404 | prdm16 | ENSLOCP00000011701 | ENSLOCP00000006441 | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Si:ch211-263k4.2. | 0.407 |
W5MPB1_LEPOC | ZNF516 | ENSLOCP00000010220 | ENSLOCP00000004743 | Uncharacterized protein. | Zinc finger protein 516. | 0.488 |
W5MTG2_LEPOC | LOC102692404 | ENSLOCP00000011671 | ENSLOCP00000011701 | Uncharacterized protein. | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.407 |
W5MTG2_LEPOC | ZNF516 | ENSLOCP00000011671 | ENSLOCP00000004743 | Uncharacterized protein. | Zinc finger protein 516. | 0.906 |
W5MTG2_LEPOC | ak9 | ENSLOCP00000011671 | ENSLOCP00000021203 | Uncharacterized protein. | Adenylate kinase 9. | 0.871 |
W5MTG2_LEPOC | bard1 | ENSLOCP00000011671 | ENSLOCP00000005344 | Uncharacterized protein. | BRCA1 associated RING domain 1. | 0.513 |
W5MTG2_LEPOC | ctbp1 | ENSLOCP00000011671 | ENSLOCP00000013457 | Uncharacterized protein. | C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.407 |
W5MTG2_LEPOC | ctbp2 | ENSLOCP00000011671 | ENSLOCP00000009690 | Uncharacterized protein. | C-terminal binding protein 2a. | 0.407 |
W5MTG2_LEPOC | kdm1a | ENSLOCP00000011671 | ENSLOCP00000005363 | Uncharacterized protein. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.822 |
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