STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plcl1Phosphoinositide phospholipase C. (884 aa)    
Predicted Functional Partners:
pip5kl1
Phosphatidylinositol-4-phosphate 5-kinase-like 1.
    
 0.747
ipmk
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.745
W5MPG8_LEPOC
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
     
 0.720
pi4ka
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
     
 0.719
DGKQ
Diacylglycerol kinase.
     
 0.715
synj1
Synaptojanin 1.
   
  0.713
dgke
Diacylglycerol kinase.
     
 0.701
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.700
gabra2
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
     
 0.700
inpp5e
Inositol polyphosphate-5-phosphatase E.
     
 0.687
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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