STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (699 aa)    
Predicted Functional Partners:
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.964
W5NFE5_LEPOC
Insulin-like growth factor 2 receptor.
    
 
 0.930
M6PR
Mannose-6-phosphate receptor, cation dependent.
    
 
 0.923
arf6
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.912
W5N1J9_LEPOC
Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.
  
0.874
rps27a
Ribosomal protein S27a.
    
   0.811
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.786
myo6
Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.705
W5MJ94_LEPOC
ADP-ribosylation factor-like 15b.
    
 0.700
mst1r
Macrophage stimulating 1 receptor b.
    
  0.700
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (28%) [HD]