GGA2 protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GGA2	M6PR	ENSLOCP00000004843	ENSLOCP00000010097	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Mannose-6-phosphate receptor, cation dependent.	0.894
GGA2	W5M302_LEPOC	ENSLOCP00000004843	ENSLOCP00000002760	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.723
GGA2	W5MJ94_LEPOC	ENSLOCP00000004843	ENSLOCP00000008453	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	ADP-ribosylation factor-like 15b.	0.734
GGA2	W5N1J9_LEPOC	ENSLOCP00000004843	ENSLOCP00000014508	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	0.813
GGA2	W5N730_LEPOC	ENSLOCP00000004843	ENSLOCP00000016439	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.904
GGA2	W5NFE5_LEPOC	ENSLOCP00000004843	ENSLOCP00000019354	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Insulin-like growth factor 2 receptor.	0.898
GGA2	arf6	ENSLOCP00000004843	ENSLOCP00000021810	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.	0.968
GGA2	rabep1	ENSLOCP00000004843	ENSLOCP00000002800	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Rabaptin, RAB GTPase binding effector protein 1.	0.904
GGA2	rps27a	ENSLOCP00000004843	ENSLOCP00000019146	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Ribosomal protein S27a.	0.783
GGA2	uba52	ENSLOCP00000004843	ENSLOCP00000002515	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.783
M6PR	GGA2	ENSLOCP00000010097	ENSLOCP00000004843	Mannose-6-phosphate receptor, cation dependent.	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	0.894
M6PR	W5M302_LEPOC	ENSLOCP00000010097	ENSLOCP00000002760	Mannose-6-phosphate receptor, cation dependent.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.484
M6PR	W5N1J9_LEPOC	ENSLOCP00000010097	ENSLOCP00000014508	Mannose-6-phosphate receptor, cation dependent.	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	0.828
M6PR	W5N730_LEPOC	ENSLOCP00000010097	ENSLOCP00000016439	Mannose-6-phosphate receptor, cation dependent.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.978
M6PR	W5NFE5_LEPOC	ENSLOCP00000010097	ENSLOCP00000019354	Mannose-6-phosphate receptor, cation dependent.	Insulin-like growth factor 2 receptor.	0.998
W5M302_LEPOC	GGA2	ENSLOCP00000002760	ENSLOCP00000004843	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	0.723
W5M302_LEPOC	M6PR	ENSLOCP00000002760	ENSLOCP00000010097	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Mannose-6-phosphate receptor, cation dependent.	0.484
W5M302_LEPOC	W5MJ94_LEPOC	ENSLOCP00000002760	ENSLOCP00000008453	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	ADP-ribosylation factor-like 15b.	0.561
W5M302_LEPOC	W5N1J9_LEPOC	ENSLOCP00000002760	ENSLOCP00000014508	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	0.838
W5M302_LEPOC	W5N730_LEPOC	ENSLOCP00000002760	ENSLOCP00000016439	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.723