STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102682744Zgc:154075. (398 aa)    
Predicted Functional Partners:
miox
Myo-inositol oxygenase.
   
 
 0.857
galk1
Galactokinase 1.
  
 0.856
galk2
Galactokinase 2.
  
 0.856
W5MST7_LEPOC
Xylose isomerase.
    
 0.839
lipt2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
    
  0.792
W5MCV8_LEPOC
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.790
rgn
Regucalcin.
  
 
 0.781
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.780
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.715
sord
Sorbitol dehydrogenase.
  
 
 0.701
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.