STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmbim6Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family. (242 aa)    
Predicted Functional Partners:
desi1
Desumoylating isopeptidase 1b.
    
   0.946
psen1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.726
W5NG78_LEPOC
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.726
GHITM
Growth hormone inducible transmembrane protein; Belongs to the BI1 family.
   
  
0.682
LOC102682884
Uncharacterized protein.
    
   0.681
W5N9N4_LEPOC
DUF862 domain-containing protein.
    
   0.681
W5NEA3_LEPOC
Desumoylating isopeptidase 2.
    
   0.681
COX20
Cytochrome c oxidase assembly factor COX20.
    
   0.681
bax
Zgc:153993.
    
 0.638
BAK1
BCL2 antagonist/killer 1.
    
 0.638
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.