STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M9I7_LEPOCLigand of numb-protein X 2a. (748 aa)    
Predicted Functional Partners:
mpp7
Membrane protein, palmitoylated 7a (MAGUK p55 subfamily member 7); Belongs to the MAGUK family.
    
 0.782
mpp3
Membrane protein, palmitoylated 3b (MAGUK p55 subfamily member 3); Belongs to the MAGUK family.
    
 0.782
mpp5
Membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.782
rps27a
Ribosomal protein S27a.
    
  0.778
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.771
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
0.726
W5NC44_LEPOC
MAGI family member, X-linked b.
    
 0.726
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.710
W5MDV9_LEPOC
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.707
prkca
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.707
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.