STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M9K5_LEPOCRAD17 checkpoint clamp loader component. (584 aa)    
Predicted Functional Partners:
rfc4
Replication factor C (activator 1) 4.
   
 0.999
rfc2
Replication factor C (activator 1) 2.
    
 0.999
rfc5
Replication factor C (activator 1) 5.
   
 0.999
rfc3
Replication factor C (activator 1) 3.
   
 0.999
W5MXW8_LEPOC
WRN RecQ like helicase.
  
 0.996
HUS1
Checkpoint protein; Belongs to the HUS1 family.
   
 0.996
rad1
RAD1 homolog (S. pombe).
   
 0.995
W5M0D4_LEPOC
SMC5-SMC6 complex localization factor 1.
  
 0.992
rad9b
RAD9 checkpoint clamp component B.
   
 0.990
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
   
 0.990
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.