STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdx1Pancreatic and duodenal homeobox 1. (260 aa)    
Predicted Functional Partners:
spopl
Speckle type BTB/POZ protein like a.
    
   0.788
LOC102689826
Speckle type BTB/POZ protein.
    
   0.788
LOC102694874
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
 0.628
LOC102695073
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
 0.628
mafa
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Aa.
    
 0.598
foxa1
Forkhead box A1.
    
 0.561
foxa2
Forkhead box A2.
    
 0.561
pax6
Paired box 6a.
   
0.555
W5NER2_LEPOC
Paired box 4.
   
0.555
ptf1a
Pancreas associated transcription factor 1a.
   
 
 0.550
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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