STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cstf3Cleavage stimulation factor, 3' pre-RNA, subunit 3. (717 aa)    
Predicted Functional Partners:
cstf1
Cleavage stimulation factor, 3' pre-RNA, subunit 1.
    
 0.999
cstf2
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 0.999
W5MFH2_LEPOC
PCF11 cleavage and polyadenylation factor subunit.
    
 0.997
tpi1
Triosephosphate isomerase.
  
 0.994
W5MPM7_LEPOC
Cleavage and polyadenylation specific factor 1.
   
 0.991
WDR33
WD repeat domain 33.
   
 0.990
pgk1
Phosphoglycerate kinase.
  
 
 0.989
mycbpap
MYCBP associated protein.
  
 
 0.989
W5N9V5_LEPOC
FIP1 like 1b (S. cerevisiae).
   
 0.985
LOC102684266
Fip1 domain-containing protein.
   
 0.985
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.