STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MAD3_LEPOCUncharacterized protein. (145 aa)    
Predicted Functional Partners:
eri1
Exoribonuclease 1.
    
 
 0.652
henmt1
HEN methyltransferase 1.
      
 0.559
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
  
 0.517
W5LXK3_LEPOC
Exonuclease domain-containing protein.
    
 
 0.509
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 
 0.503
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 
 0.503
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.493
W5LWY8_LEPOC
PRMT5_TIM domain-containing protein.
      
 0.436
W5LZ72_LEPOC
Zgc:153681.
      
 0.422
dicer1
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.418
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.