STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MAD6_LEPOCGlutamine and serine rich 1. (1841 aa)    
Predicted Functional Partners:
W5MEQ3_LEPOC
Uncharacterized protein.
   
  
 0.586
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.537
faxc
Failed axon connections homolog, metaxin like GST domain containing b.
      
 0.514
W5N4S4_LEPOC
Dual serine/threonine and tyrosine protein kinase.
      
 0.512
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
      
 0.501
W5LZ09_LEPOC
Asp_Glu_race_2 domain-containing protein.
      
 0.489
tmtc3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.455
tmtc2
Transmembrane O-mannosyltransferase targeting cadherins 2a.
   
  
 0.441
b4gat1
Beta-1,4-glucuronyltransferase 1.
   
  
 0.412
mcrip2
Si:dkey-44g23.5.
      
 0.412
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.