STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cab39Calcium binding protein 39. (353 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.979
STRADB
STE20 related adaptor beta.
    
 0.949
W5N1H3_LEPOC
STE20 related adaptor alpha.
    
 0.949
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.900
ttc33
Non-specific serine/threonine protein kinase.
    
 0.900
LOC102696188
Calcium binding protein 39, like 1.
  
  
 
0.858
cab39l
Calcium binding protein 39-like.
  
  
 
0.857
STK26
Serine/threonine kinase 26.
    
 
 0.772
STK24
Serine/threonine kinase 24.
    
 
 0.735
stk25
Serine/threonine kinase 25a.
    
 
 0.735
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.