STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MAU4_LEPOC5-hydroxytryptamine (serotonin) receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (457 aa)    
Predicted Functional Partners:
W5MPS4_LEPOC
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.658
LOC102689545
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.633
W5MIJ9_LEPOC
Si:ch211-39a7.1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
0.499
LOC102693289
Si:ch73-380n15.2.
   
 
0.499
W5NBC6_LEPOC
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
   
 
0.499
ankk1
Ankyrin repeat and kinase domain containing 1.
    
 
 0.487
ttc12
Tetratricopeptide repeat domain 12.
    
 
 0.482
W5MAQ8_LEPOC
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
      
 0.454
zw10
Zw10 kinetochore protein.
      
 0.450
ethe1
ETHE1 persulfide dioxygenase.
      
 0.450
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.