STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MAY9_LEPOCCoiled-coil domain containing 18. (1294 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
   
 
 0.574
W5MSZ4_LEPOC
Coiled-coil domain containing 13.
    
 
 0.512
ccdc12
Coiled-coil domain containing 12.
      
 0.424
W5MGQ4_LEPOC
Si:dkey-243i1.1.
      
 0.424
cep126
Centrosomal protein 126.
      
 0.422
klhdc8a
Kelch domain containing 8A.
      
 0.405
uaca
Uveal autoantigen with coiled-coil domains and ankyrin repeats b.
    
 
 0.400
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.