STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map6Microtubule-associated protein 6a. (452 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
    
  0.751
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.751
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.578
W5M6P3_LEPOC
WD repeat domain 90.
    
   0.534
tmem106b
Transmembrane protein 106Bb.
    
 0.502
W5M1L2_LEPOC
EF-hand domain (C-terminal) containing 2.
    
 
 0.466
W5MDX8_LEPOC
Sushi, nidogen and EGF-like domains 1.
    
  0.446
W5ME61_LEPOC
NIDO domain-containing protein.
    
  0.446
f3
Coagulation factor IIIa.
    
  0.446
W5M2R9_LEPOC
Si:ch211-286b4.4.
    
  0.440
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.