STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107080075Ig-like domain-containing protein. (253 aa)    
Predicted Functional Partners:
dag1
Dystroglycan 1.
    
 0.681
W5NDW5_LEPOC
Peptidase S72 domain-containing protein.
    
 0.681
LOC107075384
Uncharacterized protein.
   
 0.567
got2
Aspartate aminotransferase.
     
 0.554
vegfa
Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.
     
 0.553
nid2
Nidogen 2a (osteonidogen).
   
 0.522
W5NFR3_LEPOC
Nidogen 1b.
   
 0.522
got1
Aspartate aminotransferase.
     
 0.500
LOC102689506
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.500
W5MGE8_LEPOC
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.473
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.