STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata2Spermatogenesis associated 2. (519 aa)    
Predicted Functional Partners:
LOC102696221
Si:ch211-189a15.5.
  
  
 
0.874
W5MPX6_LEPOC
Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.
     
 0.864
W5MAK0_LEPOC
Cylindromatosis (turban tumor syndrome), b.
     
 0.795
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
     
 0.795
LOC102694913
Uncharacterized protein.
     
 0.647
W5NAV0_LEPOC
Synemin, intermediate filament protein; Belongs to the intermediate filament family.
  
  
  0.514
znf217
Zinc finger protein 217.
  
     0.417
LOC102684762
S100 calcium binding protein A11.
  
     0.417
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.