STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102684766Hairy-related 2. (163 aa)    
Predicted Functional Partners:
HES1
Hairy-related 6.
     
0.719
hes4
Hairy-related 9.
     
0.719
hes2
Hes family bHLH transcription factor 2, tandem duplicate 2.
     
0.707
LOC102695381
Hairy-related 8a.
  
  
0.675
LOC102694699
Hairy-related 8.2.
     
0.653
W5MHY9_LEPOC
FA complementation group G.
    
  0.601
W5MSG4_LEPOC
FA complementation group C.
    
  0.601
fancl
FA complementation group L.
    
  0.601
W5LWN7_LEPOC
FA complementation group E.
    
  0.508
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.508
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.