Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
W5NBN6_LEPOC | W5NMC9_LEPOC | ENSLOCP00000018045 | ENSLOCP00000021788 | Zgc:153119. | Sm domain-containing protein. | 0.968 |
W5NBN6_LEPOC | lsm2 | ENSLOCP00000018045 | ENSLOCP00000006294 | Zgc:153119. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.996 |
W5NBN6_LEPOC | lsm4 | ENSLOCP00000018045 | ENSLOCP00000002347 | Zgc:153119. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.991 |
W5NBN6_LEPOC | lsm5 | ENSLOCP00000018045 | ENSLOCP00000015887 | Zgc:153119. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.995 |
W5NBN6_LEPOC | lsm6 | ENSLOCP00000018045 | ENSLOCP00000010767 | Zgc:153119. | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.968 |
W5NBN6_LEPOC | lsm7 | ENSLOCP00000018045 | ENSLOCP00000005203 | Zgc:153119. | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.992 |
W5NBN6_LEPOC | lsm8 | ENSLOCP00000018045 | ENSLOCP00000019181 | Zgc:153119. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.992 |
W5NBN6_LEPOC | prpf4 | ENSLOCP00000018045 | ENSLOCP00000000646 | Zgc:153119. | PRP4 pre-mRNA processing factor 4 homolog (yeast). | 0.947 |
W5NBN6_LEPOC | sart3 | ENSLOCP00000018045 | ENSLOCP00000005651 | Zgc:153119. | Spliceosome associated factor 3, U4/U6 recycling protein. | 0.947 |
W5NMC9_LEPOC | W5NBN6_LEPOC | ENSLOCP00000021788 | ENSLOCP00000018045 | Sm domain-containing protein. | Zgc:153119. | 0.968 |
W5NMC9_LEPOC | lsm2 | ENSLOCP00000021788 | ENSLOCP00000006294 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.997 |
W5NMC9_LEPOC | lsm3 | ENSLOCP00000021788 | ENSLOCP00000016717 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.996 |
W5NMC9_LEPOC | lsm4 | ENSLOCP00000021788 | ENSLOCP00000002347 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.995 |
W5NMC9_LEPOC | lsm5 | ENSLOCP00000021788 | ENSLOCP00000015887 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.997 |
W5NMC9_LEPOC | lsm6 | ENSLOCP00000021788 | ENSLOCP00000010767 | Sm domain-containing protein. | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.544 |
W5NMC9_LEPOC | lsm7 | ENSLOCP00000021788 | ENSLOCP00000005203 | Sm domain-containing protein. | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.997 |
W5NMC9_LEPOC | lsm8 | ENSLOCP00000021788 | ENSLOCP00000019181 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.997 |
W5NMC9_LEPOC | prpf4 | ENSLOCP00000021788 | ENSLOCP00000000646 | Sm domain-containing protein. | PRP4 pre-mRNA processing factor 4 homolog (yeast). | 0.973 |
W5NMC9_LEPOC | sart3 | ENSLOCP00000021788 | ENSLOCP00000005651 | Sm domain-containing protein. | Spliceosome associated factor 3, U4/U6 recycling protein. | 0.944 |
lsm2 | W5NBN6_LEPOC | ENSLOCP00000006294 | ENSLOCP00000018045 | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Zgc:153119. | 0.996 |
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