STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MBA9_LEPOCNeurocan b. (1369 aa)    
Predicted Functional Partners:
W5MN85_LEPOC
Brevican.
   
0.751
VCAN
Versican.
    
0.731
acan
Aggrecan b.
    
0.726
tnr
Tenascin R (restrictin, janusin).
   
 0.651
TNN
Tenascin N.
    
 0.649
W5LZU4_LEPOC
Tenascin C.
   
 0.638
W5M7D3_LEPOC
Uncharacterized protein.
   
 0.636
ncam1
Neural cell adhesion molecule 1a.
   
 0.636
ncam2
Neural cell adhesion molecule 2.
   
 0.636
W5NG14_LEPOC
Protein tyrosine phosphatase receptor type Z1a.
   
 
 0.619
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.