STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
borcs8BLOC-1 related complex subunit 8. (128 aa)    
Predicted Functional Partners:
W5NAV3_LEPOC
Si:dkey-72l14.4.
   
 0.922
W5ND91_LEPOC
Uncharacterized protein.
   
 0.869
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
   
 0.858
borcs5
BLOC-1 related complex subunit 5.
    
 0.846
snapin
SNAP associated protein.
    
 0.842
borcs7
BLOC-1 related complex subunit 7.
    
 0.841
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 
 0.772
W5M578_LEPOC
Exosome component 9.
      
 0.538
crebl2
cAMP responsive element binding protein-like 2.
    
 
 0.515
sf3b1
Splicing factor 3b, subunit 1.
      
 0.497
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.