STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctDopachrome tautomerase. (520 aa)    
Predicted Functional Partners:
tyrp1
Tyrosinase-related protein 1a.
  
 
0.884
rab38
RAB38b, member of RAS oncogene family.
   
  
 0.691
W5N0S2_LEPOC
Glycoprotein (transmembrane) nmb.
      
 0.680
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.645
grm5
Glutamate receptor, metabotropic 5b.
    
 
 0.637
oca2
Oculocutaneous albinism II.
      
 0.635
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 
 0.629
W5MJZ4_LEPOC
Agouti signaling protein 1.
      
 0.578
W5LZ20_LEPOC
Melanocyte-stimulating hormone receptor.
    
 
 0.560
LOC102693234
Fras1 related extracellular matrix 1b.
    
 0.555
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.