STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpzl1Myelin protein zero-like 1 like. (251 aa)    
Predicted Functional Partners:
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
      
 0.561
pmp22
Peripheral myelin protein 22b.
      
 0.559
rnmt
mRNA cap guanine-N7 methyltransferase.
      
 0.531
LOC102682574
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.456
W5MKJ4_LEPOC
Protein tyrosine phosphatase non-receptor type 11b.
    
 
 0.441
W5MLN9_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 
 0.441
W5MLP2_LEPOC
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 
 0.441
MBP
Myelin basic protein.
      
 0.433
W5MQW0_LEPOC
zf-CHCC domain-containing protein.
      
 0.422
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.418
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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