STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MBV8_LEPOCUncharacterized protein. (282 aa)    
Predicted Functional Partners:
W5MBQ0_LEPOC
Matrin-type domain-containing protein.
 
  
   0.828
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.799
W5MJT7_LEPOC
V-crk avian sarcoma virus CT10 oncogene homolog.
    
 0.799
elmo2
Engulfment and cell motility 2.
    
 0.766
elmo3
Engulfment and cell motility 3.
    
 0.766
elmo1
Engulfment and cell motility 1 (ced-12 homolog, C. elegans).
    
 0.766
cdc42
Cell division cycle 42.
   
 0.517
W5LZV2_LEPOC
Si:dkey-6b12.5.
   
 0.517
rnd3
Rho family GTPase 3b.
   
 0.517
W5MCQ1_LEPOC
Rho related BTB domain containing 4.
   
 0.517
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.