STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MBY6_LEPOCUbiquitin associated protein 2a. (1172 aa)    
Predicted Functional Partners:
W5N7F7_LEPOC
Regulatory associated protein of MTOR, complex 1.
    
 
 0.822
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
   0.814
W5MJ55_LEPOC
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.738
mcat
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 0.737
CYB5R4
Cytochrome b5 reductase 4.
  
 0.723
g3bp1
GTPase activating protein (SH3 domain) binding protein 1.
   
 
 0.708
g3bp2
GTPase activating protein (SH3 domain) binding protein 2.
   
 
 0.708
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.648
W5N2R2_LEPOC
Enoyl-CoA delta isomerase 2.
  
 0.635
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.633
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.