STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB17RAB17, member RAS oncogene family. (225 aa)    
Predicted Functional Partners:
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.979
LOC102685971
Uncharacterized protein.
   
 0.978
rbsn
Rabenosyn, RAB effector.
   
 0.932
W5N6Z1_LEPOC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.924
W5NEG4_LEPOC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.924
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.909
W5NDV4_LEPOC
Early endosome antigen 1.
    
 0.904
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.883
W5LZL7_LEPOC
GTPase activating protein and VPS9 domains 1.
    
 0.852
als2
Alsin Rho guanine nucleotide exchange factor ALS2 b.
    
 0.827
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.