Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5MC91_LEPOCCadherin 16, KSP-cadherin. (745 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.991
LOC102695806
Junction plakoglobin b.
    
 0.974
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.952
W5NII4_LEPOC
Uncharacterized protein.
    
 0.951
cdh13
Cadherin 13, H-cadherin (heart).
     
0.945
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
     
0.943
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
     
0.940
CDH10
Cadherin 10, type 2a (T2-cadherin); Cadherins are calcium-dependent cell adhesion proteins.
     
0.940
LOC102686884
Cadherin 6; Cadherins are calcium-dependent cell adhesion proteins.
     
0.940
cdh5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
     
0.939
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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