STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqp3Aquaporin 3b; Belongs to the MIP/aquaporin (TC 1.A.8) family. (300 aa)    
Predicted Functional Partners:
exosc8
Exosome component 8.
    
   0.814
wtap
WT1 associated protein.
    
   0.814
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.814
W5MHP0_LEPOC
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
     
 0.790
GK3P
Glycerol kinase 3 pseudogene; Belongs to the FGGY kinase family.
 
 
 0.728
LOC102682856
Aquaporin 8a, tandem duplicate 2; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.719
W5MGC6_LEPOC
Dystrobrevin, alpha.
    
   0.719
W5NHN3_LEPOC
Dystrobrevin.
    
   0.719
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.715
aqp1
Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.714
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.