STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MCF5_LEPOCMyosin XVAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (3909 aa)    
Predicted Functional Partners:
W5M185_LEPOC
Whirlin a.
    
 0.758
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.740
ush1g
Usher syndrome 1Gb (autosomal recessive).
   
 0.740
W5M227_LEPOC
Usher syndrome 1C.
   
 0.695
MYL6B
Myosin light chain 6B.
    
 0.623
dcc
DCC netrin 1 receptor.
    
  0.621
neo1
Neogenin 1b.
    
  0.621
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
    
  0.608
CALM1
Calmodulin 1; Belongs to the calmodulin family.
    
 0.595
calm1
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.595
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.