STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab2aRAB2A, member RAS oncogene family. (212 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.926
rab14
RAB14, member RAS oncogene family.
  
 
0.898
blzf1
Basic leucine zipper nuclear factor 1.
    
 0.885
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.873
tbc1d4
TBC1 domain family, member 4.
    
 0.829
W5N5G9_LEPOC
TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1.
    
 0.829
gorasp2
Golgi reassembly stacking protein 2.
   
 0.806
gorasp1
Golgi reassembly stacking protein 1a.
   
 0.806
W5M713_LEPOC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.782
LOC102691742
CHM Rab escort protein.
    
 0.776
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.