STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tk2Thymidine kinase 2. (164 aa)    
Predicted Functional Partners:
tk1
Thymidine kinase.
  
 
 0.955
tyms
Thymidylate synthetase.
  
 0.945
W5LY93_LEPOC
NADH:ubiquinone oxidoreductase core subunit S2.
   
 0.943
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
   
 0.937
dtymk
Deoxythymidylate kinase (thymidylate kinase).
  
 
 0.934
ndufb10
NADH:ubiquinone oxidoreductase subunit B10.
   
 0.932
ndufb5
NADH:ubiquinone oxidoreductase subunit B5.
   
 0.928
ndufb8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.928
W5N207_LEPOC
NADH:ubiquinone oxidoreductase subunit A6.
   
 0.926
ndufs4
NADH:ubiquinone oxidoreductase subunit S4.
   
 0.925
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.