STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
morn3MORN repeat containing 3. (255 aa)    
Predicted Functional Partners:
morn5
MORN repeat containing 5.
  
  
 0.737
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.676
LOC102685971
Uncharacterized protein.
   
 0.676
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.638
rsph3
Radial spoke head 3.
   
 
 0.563
morn4
MORN repeat containing 4.
  
   
 0.536
morn2
MORN repeat containing 2.
  
     0.512
triap1
TP53 regulated inhibitor of apoptosis 1.
      
 0.465
RSPH1
Radial spoke head component 1.
  
 
  
0.460
rsph9
Radial spoke head 9 homolog.
   
 
 0.446
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.