STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf126Ring finger protein 126. (294 aa)    
Predicted Functional Partners:
rspo2
R-spondin 2.
    
 0.886
W5MFN8_LEPOC
R-spondin 1.
    
 0.851
get4
Guided entry of tail-anchored proteins factor 4.
   
 
 0.844
rps27a
Ribosomal protein S27a.
    
 0.797
rspo3
R-spondin 3.
    
 0.757
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.747
kmt5a
Lysine methyltransferase 5Ab.
    
  0.742
rspo4
R-spondin 4.
    
 0.742
setd7
SET domain containing 7, histone lysine methyltransferase.
    
  0.742
W5NAU2_LEPOC
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
  0.742
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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