STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptk6Tyrosine-protein kinase. (508 aa)    
Predicted Functional Partners:
W5NBD0_LEPOC
SH2 domain containing 1A duplicate b.
   
 0.881
CD247
CD247 molecule.
   
 0.792
matk
Tyrosine-protein kinase.
  
0.780
csk
Tyrosine-protein kinase.
  
0.779
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.772
mst1r
Macrophage stimulating 1 receptor b.
    
 
0.742
met
MET proto-oncogene, receptor tyrosine kinase.
    
 
0.742
W5M845_LEPOC
Uncharacterized protein.
   
 0.736
W5MH99_LEPOC
Ig-like domain-containing protein.
   
 0.729
W5LYQ5_LEPOC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.727
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.