STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr4a3Nuclear receptor subfamily 4, group A, member 3. (682 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
   
 0.819
LOC102684941
Retinoid X receptor, gamma b.
    
0.791
RXRA
Retinoid X receptor, alpha a.
    
0.791
nr1d2
Nuclear receptor subfamily 1, group D, member 2a.
    
0.688
W5M717_LEPOC
Nuclear receptor corepressor 1.
    
 0.658
W5MFZ2_LEPOC
Nuclear receptor corepressor 2.
    
 0.658
LOC102685670
Selenoprotein J.
    
 0.613
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.593
akt2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.593
W5NE85_LEPOC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.593
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.