STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102689544Rho GTPase activating protein 17b. (848 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
   
 0.907
AMOTL1
Angiomotin like 1.
    
 0.905
amot
Angiomotin.
    
 0.905
LOC102698253
Cell division cycle 42, like.
   
 0.892
amotl2
Angiomotin like 2b.
    
 0.878
rac1
Rac family small GTPase 1b.
   
  0.841
RAC3
Rac family small GTPase 3.
   
  0.841
W5MCQ1_LEPOC
Rho related BTB domain containing 4.
    
  0.743
W5N133_LEPOC
SH3-domain binding protein 1.
    
  
0.604
dgke
Diacylglycerol kinase.
      
 0.551
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.