STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryba2Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family. (215 aa)    
Predicted Functional Partners:
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.749
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
      
 0.586
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
  
0.558
cryba1
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
  
  
0.518
grifin
Galectin.
   
 
 0.464
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
      
 0.424
cluap1
Clusterin associated protein 1.
      
 0.422
vip
Vasoactive intestinal peptide.
   
    0.422
cryab
Crystallin, alpha B, b; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.420
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.