STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MDT4_LEPOCKeratin 4; Belongs to the intermediate filament family. (561 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.890
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.863
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.863
W5LYW4_LEPOC
Nuclear factor related to kappaB binding protein.
    
 0.854
mcrs1
Microspherule protein 1.
    
  0.847
ino80
INO80 complex ATPase subunit.
    
  0.843
W5LV53_LEPOC
Uncharacterized protein.
   
 0.808
W5MY44_LEPOC
INO80 complex subunit Db.
    
 0.787
ino80c
INO80 complex subunit C.
    
 0.786
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.782
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.