STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm12PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily. (380 aa)    
Predicted Functional Partners:
W5NAU2_LEPOC
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.739
setd7
SET domain containing 7, histone lysine methyltransferase.
    
 0.732
kmt5a
Lysine methyltransferase 5Ab.
    
 0.730
W5LWX1_LEPOC
C2H2-type domain-containing protein.
    
  0.717
W5NEJ9_LEPOC
Lysine (K)-specific methyltransferase 2E.
     
 0.708
W5MF61_LEPOC
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.702
W5M8W3_LEPOC
Lysine (K)-specific methyltransferase 2Ba.
    
 0.598
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 0.598
W5LZ26_LEPOC
SET and MYND domain containing 1b.
    
 0.562
smyd3
SET and MYND domain containing 3.
    
 0.562
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.