STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hif1anHypoxia inducible factor 1 subunit alpha inhibitor. (355 aa)    
Predicted Functional Partners:
notch1
Notch receptor 1a.
    
 
 0.923
trpa1
Transient receptor potential cation channel, subfamily A, member 1a; Belongs to the transient receptor (TC 1.A.4) family.
    
   0.893
W5M0H1_LEPOC
PAS domain-containing protein.
    
 0.882
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.882
W5NAL6_LEPOC
Hypoxia inducible factor 1 subunit alpha, like.
    
 0.882
epas1
Endothelial PAS domain protein 1b.
    
 0.882
TNKS2
Poly [ADP-ribose] polymerase.
    
 
 0.807
tnks
Poly [ADP-ribose] polymerase.
    
 
 0.807
W5MUZ0_LEPOC
Protein phosphatase 1, regulatory subunit 13Bb.
    
   0.671
W5NFF6_LEPOC
Tumor protein p53 binding protein, 2a.
    
   0.671
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.