STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MDW6_LEPOCKeratin 8; Belongs to the intermediate filament family. (547 aa)    
Predicted Functional Partners:
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.936
W5N075_LEPOC
BCL2 associated athanogene 3.
    
 
 0.701
krt18
Keratin 18b; Belongs to the intermediate filament family.
  
0.692
W5MDT4_LEPOC
Keratin 4; Belongs to the intermediate filament family.
  
0.685
W5NFT8_LEPOC
PDZ binding kinase.
   
 0.664
rps27a
Ribosomal protein S27a.
    
  0.652
W5M7P1_LEPOC
Ubiquitin-conjugating enzyme E2W (putative).
    
 0.643
LOC102695027
Keratin 98; Belongs to the intermediate filament family.
  
0.643
W5N2M7_LEPOC
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
0.642
LOC102686369
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
0.641
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.