STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacsin3Protein kinase C and casein kinase substrate in neurons 3. (453 aa)    
Predicted Functional Partners:
gas7
Growth arrest-specific 7a.
    
 0.544
W5LXY9_LEPOC
FCH domain only 1.
     
 0.532
W5MJ56_LEPOC
SH3-domain GRB2-like (endophilin) interacting protein 1b.
     
 0.532
W5MZ04_LEPOC
FCH domain only 2.
     
0.532
pstpip1
Proline-serine-threonine phosphatase interacting protein 1b.
     
0.442
pstpip2
Proline-serine-threonine phosphatase interacting protein 2.
     
0.439
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.